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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942503.1_cds_XP_016485950.1_76833
CDS Infomation

[gene=LOC107806328] [db_xref=GeneID:107806328] [protein=long chain acyl-CoA synthetase 6, peroxisomal-like] [protein_id=XP_016485950.1] [location=complement(join(199700..199798,199935..200021,200135..200221,201616..201701,201777..201880,202145..202231,202325..202448,202673..202791,202914..203043,203227..203315,203395..203483,203814..203907,203990..204069,204199..204288,204907..204993,205097..205141,205952..206028,206104..206218))] [gbkey=CDS]
Sequence

ATGCACCAGGGTGCTCGCGTGGGACTTTATTTCATAAATAGGCCTGAGTGGCTGATTGTA
GACTATGCCTGCTCAGCGTATTCATATACTTCAGTCCCACTATATGACACTCTAGGTCCT
GATGCTGTTAAATATATTGTCAATCATGCTGATGTACAGGCCATTTTTTGTGTGCCTGGT
ACCTTGAACACGTTGTTGACCTTTTTATCAGAGATTCCTTCTGTACGTTTGATTGTGGTA
GTGGGTGGGATAGATGAACATCTCCCATCTCTTCCATCTACAACGGGAATGAAGCTCTTA
TCATATACAAGGCTGCTGAGTCAGGGCCGCAGCAGTATGCAACCCTTTTGCCCTCCCAAG
CCTGAAGATATTGCTACCATATGCTATACAAGTGGTACTACGGGTACACCAAAGGGTGTC
GTACTATCCCATGCGAACCTGATAGCAAGTGTTGCGGGCATGACCCTTTCCATCAAGTTT
TATCCTTCTGACATATACATATCCTATCTGCCTCTCGCGCATATCTATGAACGTGCCAAC
CAAATTACATCGGTATATTATGGTGTTGCTGTTGGCTTCTACCAGGGGGACAATCTGAAA
TTGATGGATGATTTGGCGACACTTAGACCTACAATATTTAGCAGTGTTCCTCGTCTTTAC
AACAGGATATATGCTGGGATCACAAATGCTGTACAAACTTCTGGCGTACTGAAGCAGAGA
CTTTTCAATGCTGCCTACAACTCCAAGAAGCAAGCTGTCATGAATGGTAGAAAGCCATCA
CCAATGTGGGATAGATTGGTATTCAACAAAATAAAGGACAAACTGGGGGGGCGAGTTCGT
CTTATGACCTCAGGTGCTTCACCATTGTCGCCTGACGTGATGGAGTTCTTGAGAGTATGT
TTTGGCTGTCTAGTAATGGAAGGGTATGGCATGACTGAAACTTCGTGTGTCATAAGCTCA
ATGGACGATAGTGATATCTTAACTGGTCATGTTGGTTCACCAAATCCTGCATGTGAGATA
AAGCTCGTGGATGTTCCGGAAATGAGTTACACATCAGAAGATCAGCCTCATCCTCGTGGA
GAGATTTGTGTTAGAGGTCCTATTATTTTTGAAGGCTATTACAAAGATGAAGTGCAGACG
AGGGAGGTAATTGATGAAGACGGGTGGCTGCATACTGGTGATATTGGATTATGGTTACCT
GGAGGCCGCTTGAAGATTATTGACAGGAAGAAGAATATCTTCAAGTTGGCACAAGGTGAA
TACATAGCTCCTGAGAAAATTGAGAATGCTTATGCCAAATGCAAATTTGTTGCACAGTGT
TTTGTCTATGGTGATAGCTTTAATTCCTCTTTAGTAGCAGTAGTTTGTGTAGAGCCAGAT
GTCTTTAAGGAATGGGCATCATCTGAGGGAATCAAGTATGAAAGTTTGGGACAACTGTGT
AATGATCCAAGAGCGAAGGCTGCAGTTCTTGCTGAGATGGATGCTGTTGGAAGGGAAGCT
CAGTTGAGAGGTTTCGAATTTGCAAAAGCTGTAACATTGGTTATCGAGCCTTTCACGATC
GAAAACGGTCTGCTCACTCCCACATTCAAGGTCAAGAGACCGCAGGCAAAGGCTTATTTC
GCCAAAGCAATATCTGATATGTATAATGAGCTTTCTACATCAGATCCAGCATCCCAGAAA
TCACTATGA

Peptide Sequence

PEP ID

XP_016485950.1
PEP Infomation

PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal-like [Nicotiana tabacum]
Sequence

MHQGARVGLYFINRPEWLIVDYACSAYSYTSVPLYDTLGPDAVKYIVNHADVQAIFCVPG
TLNTLLTFLSEIPSVRLIVVVGGIDEHLPSLPSTTGMKLLSYTRLLSQGRSSMQPFCPPK
PEDIATICYTSGTTGTPKGVVLSHANLIASVAGMTLSIKFYPSDIYISYLPLAHIYERAN
QITSVYYGVAVGFYQGDNLKLMDDLATLRPTIFSSVPRLYNRIYAGITNAVQTSGVLKQR
LFNAAYNSKKQAVMNGRKPSPMWDRLVFNKIKDKLGGRVRLMTSGASPLSPDVMEFLRVC
FGCLVMEGYGMTETSCVISSMDDSDILTGHVGSPNPACEIKLVDVPEMSYTSEDQPHPRG
EICVRGPIIFEGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGE
YIAPEKIENAYAKCKFVAQCFVYGDSFNSSLVAVVCVEPDVFKEWASSEGIKYESLGQLC
NDPRAKAAVLAEMDAVGREAQLRGFEFAKAVTLVIEPFTIENGLLTPTFKVKRPQAKAYF
AKAISDMYNELSTSDPASQKSL

Transcript Sequence

Gene sequence data has not been registered.